Whole genome sequencing of Paracoccus denitrificans HAMBI_2443; long ... - SRA

SRX22725484: Whole genome sequencing of Paracoccus denitrificans HAMBI_2443; long read
1 PACBIO_SMRT (Sequel IIe) run: 77,753 spots, 775.5M bases, 633.4Mb downloads

Design: DNA fragmentation using the Covaris g-TUBE. Libraries prep with PacBio SMRTbell prep kit 3.0 with the SMRTbell barcoded adapter plate 3.0. Sequel II binding kit 3.2 for pooled library cleanup.

Submitted by: University of Turku

Study: Genome sequencing and assembly of bacterial species from a model synthetic community

PRJNA1047486 • SRP475574 • All experiments • All runs

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Raw sequence reads (Illumina, PacBio, Oxford Nanopore) and whole genome assemblies for 30 bacterial species from the HAMBI culture collection (University of Helsinki). These species are commonly used to construct synthetic communities for ecological and evolutionary studies.

Sample: Soil: Garden soil, Delft, Netherlands

SAMN38562716 • SRS19714559 • All experiments • All runs

Organism: Paracoccus denitrificans

Library:

Name: HAMBI_2443-longread

Instrument: Sequel IIe

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 77,753 spots, 775.5M bases, 633.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR27033713	77,753	775.5M	633.4Mb	2023-12-04

ID:: 30760040

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